scanpy — Easy Examples
Single-cell RNA-seq analysis: preprocessing, clustering, visualization
Getting started with scanpy
Installation and basic usage of scanpy.
python
# Install: pip install scanpy import scanpy # Basic scanpy usage print(f"Using scanpy") # See documentation for detailed examples
Expected Output
# Expected output shown below # (Run locally with: scanpy)
scanpy is a third-party package. Single-cell RNA-seq analysis: preprocessing, clustering, visualization. Install with: pip install scanpy
Common scanpy operations
Frequently used features of scanpy.
python
# Install: pip install scanpy import scanpy # Common scanpy patterns print(f"scanpy version: {scanpy.__version__}")
These are the most commonly used features of scanpy in everyday development.
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