pysam
Package — BioinformaticsPython 3.7+Expert
Read and manipulate SAM/BAM/CRAM alignment files
Quick Info
- Documentation
- Official Docs
- Python Version
- 3.7+
- Dependencies
- None (C extension wrapping htslib)
- Install
pip install pysam
Learn by Difficulty
Quick Example
python
# Install: pip install pysam import pysam # Basic pysam usage print(f"Using pysam") # See documentation for detailed examples
pysam is a third-party package. Read and manipulate SAM/BAM/CRAM alignment files. Install with: pip install pysam
Try in PlaygroundTags
packagebioinformaticsgenomicslife-science